Combined burden and functional impact tests for cancer driver discovery using DriverPower
- Creator: Shuai, Shimin , Abascal, Federico , Carlevaro-Fita, Joana , Chakravarty, Dimple , Chan, Calvin Wing Yiu , Chen, Ken , Choi, Jung Kyoon , Deu-Pons, Jordi , Dhingra, Priyanka , Diamanti, Klev , Feuerbach, Lars , Fink, J. Lynn , Amin, Samirkumar B. , Scarlett, Christopher J. , Frigola, J , Gambacorti-Passerini, C , Garsed, DW , Getz, G , Guo, Q , Gut, IG , Bader, Gary D. , Bandopadhayay, Pratiti , Beroukhim, Rameen , Bertl, Johanna , Boroevich, Keith A. , Brunak, Søren , Campbell, Peter J.
- Resource Type: journal article
- Date: 2020
Genomic footprints of activated telomere maintenance mechanisms in cancer
- Creator: Sieverling, Lina , Hong, Chen , Park, Peter J. , Eils, Roland , Schlesner, Matthias , Akdemir, Kadir C. , Alvarez, Eva G. , Baez-Ortega, Adrian , Beroukhim, Rameen , Boutros, Paul C. , Bowtell, David D. L. , Brors, Benedikt , Koser, Sandra D. , Burns, KH , Campbell, PJ , Chan, K , Chen, K , Dueso-Barroso, A , Dunford, AJ , Edwards, PA , Estivill, X , Etemadmoghadam, D , Feuerbach, L , Ginsbach, Philip , Fink, JL , Frenkel-Morgenstern, M , Garsed, DW , Gerstein, M , Gordenin, DA , Haan, D , Haber, JE , Hess, JM , Imielinski, M , Jones, DTW , Kleinheinz, Kortine , Ju, YS , Kazanov, MD , Klimczak, LJ , Koh, Y , Korbel, JO , Kumar, K , Lee, EA , Lee, JJK , Li, Y , Lynch, AG , Hutter, Barbara , Macintyre, G , Markowetz, F , Martincorena, I , Martinez-Fundichely, A , Meyerson, M , Miyano, S , Nakagawa, H , Navarro, FCP , Ossowski, S , Pearson, JV , Braun, Delia M. , Puiggròs, M , Rippe, K , Roberts, ND , Roberts, SA , Rodriguez-Martin, B , Schumacher, SE , Scully, R , Shackleton, M , Sidiropoulos, N , Stewart, C , Cortés-Ciriano, Isidro , Torrents, D , Tubio, JMC , Villasante, I , Waddell, N , Wala, JA , Weischenfeldt, J , Yang, L , Yao, X , Yoon, SS , Zamora, J , Xi, Ruibin , Zhang, CZ , Aaltonen, LA , Abascal, F , Abeshouse, A , Aburatani, H , Adams, DJ , Agrawal, N , Ahn, KS , Ahn, SM , Aikata, H , Kabbe, Rolf , Akbani, R , Akdemir, KC , Al-Ahmadie, H , Scarlett, Christopher J.
- Resource Type: journal article
- Date: 2020
Inferring structural variant cancer cell fraction
- Creator: Cmero, Marek , Yuan, Ke , Cao, Shaolong , Scarlett, Christopher J. , Christie, Elizabeth L. , Cun, Yupeng , Dawson, Kevin J. , Demeulemeester, Jonas , Dentro, Stefan C. , Deshwar, Amit G. , Donmez, Nilgun , Drews, Ruben M. , Eils, Roland , Ong, Cheng Soon , Fan, Y , Fittall, MW , Garsed, DW , Gerstung, M , Getz, G , Gonzalez, S , Ha, G , Haase, K , Imielinski, M , Jerman, L , Schröder, Jan , Ji, Y , Jolly, C , Kleinheinz, K , Lee, J , Lee-Six, H , Leshchiner, I , Livitz, D , Malikic, S , Martincorena, I , Mitchell, TJ , Adams, David J. , Morris, QD , Mustonen, V , Oesper, L , Peifer, M , Peto, M , Raphael, BJ , Rosebrock, D , Rubanova, Y , Sahinalp, SC , Salcedo, A , Anur, Pavana , Schlesner, M , Schumacher, SE , Sengupta, S , Shi, R , Shin, SJ , Spellman, PT , Spiro, O , Stein, LD , Tarabichi, M , Van Loo, P , Beroukhim, Rameen , Vembu, S , Vázquez-García, I , Wang, W , Wedge, DC , Wheeler, DA , Wintersinger, JA , Yang, TP , Yao, X , Yu, K , Zhu, H , Boutros, Paul C. , Corcoran, NM , Papenfuss, T , Hovens, CM , Markowetz, F , Macintyre, G , Aaltonen, LA , Abascal, F , Abeshouse, A , Aburatani, H , Adams, DJ , Bowtell, David D. L. , Agrawal, N , Ahn, KS , Ahn, SM , Aikata, H , Akbani, R , Akdemir, KC , Al-Ahmadie, H , Al-Sedairy, ST , Al-Shahrour, F , Alawi, M , Campbell, Peter J. , Albert, M , Aldape, K , Alexandrov, LB , Ally, A , Alsop, K , Alvarez, EG , Amary, F , Amin, SB , Aminou, B , Ammerpohl, O
- Resource Type: journal article
- Date: 2020